ENT s2e10 “Vanishing Point”
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This was actually the first ever Star Trek episode I’d seen and terrified me. Avoided the show(s) for a few years because of it.
Beaming in general is terrifying. You are destroyed on a molecular level and then reconstructed somewhere else. Is that at the new location actually you, or just a convincing clone? What does it matter for the others around you, as the clone has and is everything you previously were, but you are actually dead.
Wonder if they used it medically and for cosmetic surgeries. Nose too long? Cancerous growth? We’ll remove that while you beam
Several episodes mention “biofilters” that eliminate viruses during transport. So yes there’s already some modification going on!